Index

Symbols

--chrom <chrom> segtools-signal-distribution command line option --clobber command line option --create-mnemonics segtools-signal-distribution command line option --groups segtools-aggregation command line option --help command line option --indir <dir> segtools-signal-distribution command line option --min-overlap <n> segtools-overlap command line option --mnemonic-file <file> command line option --mode <mode> segtools-aggregation command line option --noplot command line option --normalize segtools-aggregation command line option --outdir <dir> command line option --quick command line option

--quiet command line option --replot command line option --transformation <transformation> segtools-signal-distribution command line option --version command line option -c <chrom> segtools-signal-distribution command line option -h command line option -i <dir> segtools-signal-distribution command line option -m <file> command line option -o <dir> command line option -q command line option -R <PARAM=VAL> command line option -t <transformation> segtools-signal-distribution command line option

C

command line option --clobber --help --mnemonic-file <file> --noplot --outdir <dir> --quick --quiet --replot --version -h -m <file> -o <dir> -q -R <PARAM=VAL>

S

segtools-aggregation command line option --groups --mode <mode> --normalize segtools-overlap command line option --min-overlap <n> segtools-signal-distribution command line option --chrom <chrom> --create-mnemonics --indir <dir> --transformation <transformation> -c <chrom> -i <dir> -t <transformation>